You should be able to see about 1 2 to 3 4 of the shaft.
How to adjust garage door side to side.
By pushing the door back into position you should have made the vertical track straighten.
Look at the tracks.
Have a helper steady the ladder.
Trim the door to fit.
Locate the limit adjustments screws located on the side of the opener.
Adjust the brackets on both sides of the door until you have a consistent garage door track margins.
A very small gap is fine and will let your garage breathe.
It is possible that the vertical track down the side has gone out of alignment and shifted due to a slightly loose lag screw.
If the door was closing too quickly move the spring to the next higher hole on the bracket.
Once the spring is free of tension remove from its track hanger.
Push the door back to adjust the door and get the center aligned again.
These may be on the side of the box but are usually at.
These are normally plastic and will be marked either up and down or open and close step 3 if you wish for the door opening height to increase you will turn the up or open screw in a clockwise direction.
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Adjust your limit switches.
They re there to create a seal.
If it was opening too quickly move it to the next lower hole.
Look for two limit adjustment screws.
The stops on your garage door are rubber seal that runs along the edges of your garage door.
Adjust the springs on both sides of the door the same way.
Adjusting the overhead track the overhead portion of the garage door track only has one adjustment point.
Check that it is straight.
Place a stepladder beneath the box portion of the garage door opener.